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Publications in peer reviewed journals, acknowledging the Framework Programme funding; alphabetic, ascending by first author.
- Alam I, Koller DL, Sun Q, Roeder RK, Cañete T, Blázquez G, López-Aumatell R, Martínez-Membrives E, Vicens-Costa E, Mont C, Díaz S, Tobeña A, Fernández-Teruel A, Whitley A, Strid P, Diez M, Johannesson M, Flint J, Econs MJ, Turner CH, Foroud T (2011): Heterogeneous stock rat: A unique animal model for mapping genes influencing bone fragility. Bone, 48(5), 1169-1177.
- Blair K, Leitch HG, Mansfield W, Dumeau CE, Humphreys P, Smith AG (2012): Culture parameters for stable expansion, genetic modification and germline transmission of rat pluripotent stem cells. Biology Open, 1, 58-65.
- Bottolo L, Chadeau-Hyam M, Hastie DI, Langley SR, Petretto E, Tiret L, Tregouet D, Richardson S (2011): ESS++: a C++ objected-oriented algorithm for Bayesian stochastic search model exploration. Bioinformatics, 27(4), 587-8.
- Cazier JB, Kaisaki PJ, Argoud K, Blaise B, Veselkov K, Ebbels T, Tsang T, Wang Y, Bihoreau MT, Mitchell SC, Holmes E, Lindon JC, Scott J, Nicholson JK, Dumas ME, Gauguier D (2012): Untargeted metabolome quantitative trait locus mapping associates variation in urine glycerate to mutant glycerate kinase. J Proteome Res, 11(2), 631-42.
- Dumas ME, Gauguier D (2012): mQTL – The missing link between metabolome-wide association studies and systems biology. Genetics meets Metabolomics: from Experiment to Systems Biology. K Suhre Ed. Springer, New York, NY, USA, in press.
go to: Springer website - Guo* W, Schafer* S, Greaser ML, Radke MH, Liss M, Govindarajan T, Maatz H, Schulz H, Li S, Parrish AM, Dauksaite V, Vakeel P, Klaassen S, Gerull B, Thierfelder L, Regitz-Zagrosek V, Hacker TA, Saupe KW, Dec GW, Ellinor PT, Macrae CA, Spallek B, Fischer R, Perrot A, Ozcelik C, Saar K, Hubner N, Gotthardt M. (2012): RBM20, a gene for hereditary cardiomyopathy, regulates titin splicing. Nature Medicine, 18, 766-773.
* contributed equally to this work - Heinig M, Petretto E, Wallace C, Bottolo L, Rotival M, Lu H, Li Y, Sarwar R, Langley SR, Bauerfeind A, Hummel O, Lee YA, Paskas S, Rintisch C, Saar K, Cooper J, Buchan R, Gray EE, Cyster JG; Cardiogenics Consortium, Erdmann J, Hengstenberg C, Maouche S, Ouwehand WH, Rice CM, Samani NJ, Schunkert H, Goodall AH, Schulz H, Roider HG, Vingron M, Blankenberg S, Münzel T, Zeller T, Szymczak S, Ziegler A, Tiret L, Smyth DJ, Pravenec M, Aitman TJ, Cambien F, Clayton D, Todd JA, Hubner N, Cook SA. (2010): A trans-acting locus regulates an anti-viral expression network and type 1 diabetes risk. Nature, 467(7314), 460-464.
- Holmdahl R (2010): At last; Rats lacking B cells. Eur J Immunol, 40(10), 2680-1.
- Houstek J, Hejzlarova K, Vrbacky M, Drahota Z, Landa V, Zidek V, Mlejnek P, Simakova M, Silhavy J, Miksik I, Kazdova L, Oliyarnyk O, Kurtz TW, Pravenec M (2012): Nonsynonymous variants in mt-Nd2, mt-Nd4, and mt-Nd5 are linked to effects on oxidative phosphorylation and insulin sensitivity in rat conplastic strains. Physiological Genomics, 44(9), 487-94.
- Hultqvist M, Sareila O, Vilhardt F, Norin U, Olsson LM, Olofsson P, Hellman U, Holmdahl R (2011): Positioning of a Polymorphic Quantitative Trait Nucleotide in the Ncf1 Gene Controlling Oxidative Burst Response and Arthritis Severity in Rats. Redox Signal, 14(12), 2373-83.
- Leitch HG, Blair K, Mansfield W, Ayetey H, Humphreys P, Nichols J, Surani MA, Smith A (2010): Embryonic germ cells from mice and rats exhibit properties consistent with a generic pluripotent ground state. Development and stem cells, 137(14), 2279-87.
- Liskovykh M, Chuykin I, Ranjan A, Safina D, Popova E, Tolkunova E, Mosienko V, Minina J, Zhdanova N, Mullins JJ, Bader M, Alenina N, Tomilin A (2011): Derivation, characterization, and stable transfection of induced pluripotent stem cells from Fischer344 rats (2011): PLoS One, 6, e273.
- McDermott-Roe C, Ye J, Ahmed R, Sun XM, Serafín A, Ware J, Bottolo L, Muckett P, Cañas X, Zhang J, Rowe GC, Buchan R, Lu H, Braithwaite A, Mancini M, Hauton D, Martí R, García-Arumí E, Hubner N, Jacob H, Serikawa T, Zidek V, Papousek F, Kolar F, Cardona M, Ruiz-Meana M, García-Dorado D, Comella JX, Felkin LE, Barton PJ, Arany Z, Pravenec M, Petretto E, Sanchis D, Cook SA (2011): Endonuclease G is a novel determinant of cardiac hypertrophy and mitochondrial function. Nature, 478(7367), 114-118.
- Neckář J, Šilhavy J, Zídek V, Landa V, Mlejnek P, Šimáková M, Seidman JG, Seidman C, Kazdová L, Klevstig M, Novák F, Vecka M, Papoušek F, Houštěk J, Drahota Z, Kurtz TW, Kolář F, Pravenec M (2012): CD36 overexpression predisposes to arrhythmias but reduces infarct size in spontaneously hypertensive rats: gene expression profile analysis. Physiological Genomics, 44(2), 173-182.
- Nijman IJ, Mokry M, van Boxtel R, Toonen P, de Bruijn E, Cuppen E (2010): Mutation discovery by targeted genomic enrichment of multiplexed barcoded samples. Nature Methods, 7(11), 913-5.
- Pontoizeau C, Fearnside J, Navratil V, Domange C, Cazier JB, Fernandez-Santamaria C, Kaisaki PJ, Emsley L, Toulhoat P, Bihoreau MT, Nicholson JK, Gauguier D, Dumas ME (2011): Broad-range natural metabotype variation drives physiological plasticity in control healthy inbred rat strains. J Proteome Res, 10(4), 1675-89.
- Popova E, Bader M, Krivokharchenko A (2011): Effect of culture conditions on viability of mouse and rat embryos developed in vitro. Genes, 2, 332-44.
- Popova E, Bader M, Krivokharchenko A (2011): Effects of electric field on early preimplantation development in vitro in mice and rats. Human Reproduction, 26, 662-70.
- Pravenec M, Kajiya T, Zídek V, Landa V, Mlejnek P, Simáková M, Silhavý J, Malínská H, Oliyarnyk O, Kazdová L, Fan J, Wang J, Kurtz TW (2011): Effects of human C-reactive protein on pathogenesis of features of the metabolic syndrome. Hypertension, 57(1), 731-37.
- Simonis M, Atanur SS, Linsen SE, Guryev V, Ruzius FP, Game L, Lansu N, de Bruijn E, van Heesch S, Jones SJ, Pravenec M, Aitman TJ, Cuppen E (2012): Genetic basis of transcriptome differences between the founder strains of the rat HXB/BXH recombinant inbred panel. Genome Biology, 13:R31, [epub ahead of print].
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CreatedThursday, 01 April 2010
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Created byErik Werner
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Last modifiedTuesday, 29 May 2012
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Revised byErik Werner
